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Acidithiobacillus ferrooxidans (Temple and Colmer) Kelly and Wood

19859

This strain is recommended by ATCC® for use in the tests described in ASTM Standard Test Method E1357-90 where only the taxon is specified.
Product category
Bacteria
Product type
Extremophile
Strain designation
NCIB 9490
Type strain
No
Isolation source
Mine water
Product format
Test tube
Storage conditions
See handling procedure
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Documentation

ATCC determines the biosafety level of a material based on our risk assessment as guided by the current edition of Biosafety in Microbiological and Biomedical Laboratories (BMBL), U.S. Department of Health and Human Services. It is your responsibility to understand the hazards associated with the material per your organization’s policies and procedures as well as any other applicable regulations as enforced by your local or national agencies.

ATCC highly recommends that appropriate personal protective equipment is always used when handling vials. For cultures that require storage in liquid nitrogen, it is important to note that some vials may leak when submersed in liquid nitrogen and will slowly fill with liquid nitrogen. Upon thawing, the conversion of the liquid nitrogen back to its gas phase may result in the vial exploding or blowing off its cap with dangerous force creating flying debris. Unless necessary, ATCC recommends that these cultures be stored in the vapor phase of liquid nitrogen rather than submersed in liquid nitrogen.

Detailed product information

General

Specific applications
Produces hydrogen sulfide:ferric ion oxidoreductase
Testing of bioleaching rate of iron from pyrite
This strain is recommended by ATCC for use in the tests described in ASTM Standard Test Method E1357-90 where only the taxon is specified.
Biotechnology
Preceptrol
No

Characteristics

Extremophile type
Acidophile
Metallotolerant
Sulfur oxidizer
Comments
Removal of iron pyrite from coal

Handling information

Medium
Temperature
26°C
Atmosphere
Aerobic
Handling procedure
  1. Incubate test tube cultures under above conditions upon receipt.  It is helpful to incubate test tubes in a slanted position to increase gas exchange in broth.  Transfer culture to fresh media within one week of arrival.
  2. Gently vortex the test-tube to dislodge the iron that has oxidized onto the glass.  Aseptically withdraw approximately 1.0 mL of the broth culture and transfer into 5 mL of fresh broth.
  3. Incubate the broth in a static and slanted position.
  4. Growth is evident within one to two weeks, when yellow-orange iron oxide deposits are observed.
  5. Transfer the culture approximately every two to four weeks.
  6. Transfer more tubes than needed as a backup source in the event of low viability due to repeated passage.  The culture will remain viable for a minimum of one month and for up to three months when stored at room temperature without shaking.
Handling notes
The cells are motile and rod-shaped.
This strain is cited to produces hydrogen sulfide:ferric ion oxidoreductase (Appl. Environ. Microbiol. 58: 431-433, 1992) and is used in the testing of the bioleaching rate of iron from pyrite.
Additional information on this culture is available on the ATCC® web site at www.atcc.org.

History

Deposited as
Thiobacillus ferrooxidans Temple and Colmer
Depositors
NCIMB
Chain of custody
ATCC <-- NCIMB <-- P Trussell
Type of isolate
Environmental
Cross references
GenBank X70355 T.ferrooxidans genes rbcL and rbcS.
GenBank M11542 Thiobacillus ferrooxidans 5S ribosomal RNA.
GenBank M79402 Thiobacillus ferrooxidans 16S rRNA sequence.
GenBank M79403 Thiobacillus ferrooxidans 16S rRNA sequence.
GenBank AH001791 Thiobacillus ferrooxidans 16S rRNA sequence.
GenBank J03859 T.ferrooxidans (ATCC 19859) DNA with a transposon IST2 insertion.
GenBank AJ312238 Acidithiobacillus ferrooxidans p21Atf gene for rhodanese-like protein.
GenBank U66426 Thiobacillus ferrooxidans insertion sequence ISTfe1 transposase gene, complete cds.
GenBank S73481 serine-rich protein...serine-rich protein {IST2, repetitive element, spacer region} [Thiobacillus ferrooxidans, ATCC 19859, Transposon Insertion, 3 genes, 925 nt].
GenBank AF362022 Acidithiobacillus ferrooxidans strain ATCC 19859 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region, complete sequence; and 23S ribosomal RNA gene, partial sequence.
GenBank AF220499 Acidithiobacillus ferrooxidans putative cytochrome c-552 diheme precursor (cycA), putative glucose/ribitol short chain dehydrogenase (sdrA), putative ubiquinol-cytochrome c reductase iron-sulfur Rieske protein (petA), putative cytochrome b

Legal disclaimers

Intended use
This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use.
Warranty

The product is provided 'AS IS' and the viability of ATCC® products is warranted for 30 days from the date of shipment, provided that the customer has stored and handled the product according to the information included on the product information sheet, website, and Certificate of Analysis. For living cultures, ATCC lists the media formulation and reagents that have been found to be effective for the product. While other unspecified media and reagents may also produce satisfactory results, a change in the ATCC and/or depositor-recommended protocols may affect the recovery, growth, and/or function of the product. If an alternative medium formulation or reagent is used, the ATCC warranty for viability is no longer valid.  Except as expressly set forth herein, no other warranties of any kind are provided, express or implied, including, but not limited to, any implied warranties of merchantability, fitness for a particular purpose, manufacture according to cGMP standards, typicality, safety, accuracy, and/or noninfringement.

Disclaimers

This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use. Any proposed commercial use is prohibited without a license from ATCC.

While ATCC uses reasonable efforts to include accurate and up-to-date information on this product sheet, ATCC makes no warranties or representations as to its accuracy. Citations from scientific literature and patents are provided for informational purposes only. ATCC does not warrant that such information has been confirmed to be accurate or complete and the customer bears the sole responsibility of confirming the accuracy and completeness of any such information.

This product is sent on the condition that the customer is responsible for and assumes all risk and responsibility in connection with the receipt, handling, storage, disposal, and use of the ATCC product including without limitation taking all appropriate safety and handling precautions to minimize health or environmental risk. As a condition of receiving the material, the customer agrees that any activity undertaken with the ATCC product and any progeny or modifications will be conducted in compliance with all applicable laws, regulations, and guidelines. This product is provided 'AS IS' with no representations or warranties whatsoever except as expressly set forth herein and in no event shall ATCC, its parents, subsidiaries, directors, officers, agents, employees, assigns, successors, and affiliates be liable for indirect, special, incidental, or consequential damages of any kind in connection with or arising out of the customer's use of the product. While reasonable effort is made to ensure authenticity and reliability of materials on deposit, ATCC is not liable for damages arising from the misidentification or misrepresentation of such materials.

Please see the material transfer agreement (MTA) for further details regarding the use of this product. The MTA is available at www.atcc.org.

Permits & Restrictions

Import Permit for the State of Hawaii

If shipping to the U.S. state of Hawaii, you must provide either an import permit or documentation stating that an import permit is not required. We cannot ship this item until we receive this documentation. Contact the Hawaii Department of Agriculture (HDOA), Plant Industry Division, Plant Quarantine Branch to determine if an import permit is required.

MORE INFORMATION ABOUT PERMITS AND RESTRICTIONS

Frequently Asked Questions

References

Curated Citations

Hoffmann MR, et al. Kinetics of the removal of iron pyrite from coal by microbial catalysis. Appl. Environ. Microbiol. 42: 259-271, 1981.

Appl. Microbiol. 11: 105, 1963.

Appl. Microbiol. 12: 122, 1964.

Sugio T, et al. Existence of a hydrogen sulfide:Ferric ion oxidoreductase in iron-oxidizing bacteria. Appl. Environ. Microbiol. 58: 431-433, 1992.

. . J. Bacteriol. 85: 78 and 595, 1963.

View All Curated Citations for this Product

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