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TSD-288

TSD-288

Bdellovibrio reynosensis LBG001 is a bacterial type strain that was isolated in 2019 from soil in Mexico. This type strain is an obligate predator and requires prey Gram-negative bacteria for growth. The strain grows best in HEPES complete buffer at 20-30°C at ambient temperatures.
Product category
Bacteria
Product type
Drug-resistant bacterium
Strain designation
LBG001
Type strain
Yes
Isolation source
Soil
Geographical isolation
Mexico; Tamaulipas
Applications
Antimicrobial resistance research
Product format
Frozen
Storage conditions
-80°C or colder
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Documentation

ATCC determines the biosafety level of a material based on our risk assessment as guided by the current edition of Biosafety in Microbiological and Biomedical Laboratories (BMBL), U.S. Department of Health and Human Services. It is your responsibility to understand the hazards associated with the material per your organization’s policies and procedures as well as any other applicable regulations as enforced by your local or national agencies.

ATCC highly recommends that appropriate personal protective equipment is always used when handling vials. For cultures that require storage in liquid nitrogen, it is important to note that some vials may leak when submersed in liquid nitrogen and will slowly fill with liquid nitrogen. Upon thawing, the conversion of the liquid nitrogen back to its gas phase may result in the vial exploding or blowing off its cap with dangerous force creating flying debris. Unless necessary, ATCC recommends that these cultures be stored in the vapor phase of liquid nitrogen rather than submersed in liquid nitrogen.

Detailed product information

General

Preceptrol
No

Characteristics

Susceptibility profile
Resistant
Kanamycin
Streptomycin
Tetracycline
Ampicillin

Susceptible
Chloramphenicol
Comments
The depositor provides that this strain is an obligate predator that requires prey Gram-negative bacteria for growth. Prefers encapsulated prey, but will grow on acapsular prey, albeit very slowly and inefficiently. The strain is plaque forming on encapsulated Gram-negative bacteria:  Klebsiella pneumoniae (ATCC 43816), Acinetobacter baumannii, and Escherichia coli. It is resistant to kanamycin, streptomycin, gentamycin, tetracycline and ampicillin but sensitive to chloramphenicol.
Type strain description
This culture provided to the ATCC type strain depository is neither produced nor characterized by ATCC. No technical information is available on this material. Refer to depositor for technical information on this strain.
Technical information
ATCC Technical Services does not have technical information on type strain deposits that are not fully characterized. Additional information can be found in the depositor’s publication.

Handling information

Temperature
20-30°C
Atmosphere
Aerobic
Incubation
1 day
Depositor-recommended growth conditions

Resuspend encapsulated prey bacteria cell pellet (e.g., K. pneumoniae ATCC 43816) to a concentration of 1 × 109 CFU/mL (optical density at 600 nm of ~2) in sterile 25 mM HEPES complete buffer (1L HEPES supplemented with 3.33 ml of 0.6 M MgCl2.7H2O and 6 ml of 0.5 M CaCl2·2H2O).

Defined or complex media can not support growth of Bdellovibrio reynosensis. It must be co-cultured with encapsulated prey cells. The prey cells, such as K. pneumoniae (ATCC 43816), are grown in rich media, centrifuged, and the cell pellet resuspended in HEPES complete buffer. Then co-culture with B. reynosensis (from glycerol stock, or a fresh plaque taken from a soft agar lawn of prey cells) with the prey cells in HEPES buffer. Incubate 1-3 days at 20-30°C with aeration. Monitor lysis of prey cells and appearance of small, motile B. reynosensis cells by Dark Field or Phase Contrast microscopy.

 

Handling procedure

Depositor suggests to incubate 1-3 days at 20-30°C with aeration. The resulting lysate can be stored for up to a month at 4 °C. The lysate can be subcultured indefinitely, though it it unknown if B. reynosensis will mutate during repeated passaging. Consecutive subcultures can be done every 1-3 days. Alternatively the co-culture can be used to produce plaques in a DNB soft agar or soft agarose thin layer containing 5 × 109 CFU/mL of encapsulated prey. DNB soft agar or agarose is 5 g Agar or Agarose, 0.8 g Nutrient Broth (BD Difco™ Nutrient Broth, catalog number BD 234000) in 1L H2O; autoclave; cool to 55°C before use. A plaque can then be excised with a pasteur pipet and used to seed a fresh co-culture of prey cells. 

Remove residual prey cells by clarifying, then filtering a fresh lysate. Clarify by centrifugation at 3,000 RCF for 2 minutes in a microfuge tube, or for larger volumes such as 50 mL, centrifuge at 2,500 RCF for 10 minutes. Pour off and save supernatant in a new tube. Filter the supernatant through a 0.45 µm pore size filter, saving the filtrate. A 0.45 µm pore size allows passage of B. reynosense but not larger prey cells such as K. pneumoniae. For small volumes, use a 4 mm diameter syringe filter (e.g., MilliporeSigma™ Millex™ Syringe Filters with PE Housing - PVDF Membrane - 4mm Diameter, catalog number SLHVR04NL). Larger diameter syringe filters will not allow passage of B. reynosensis. For larger volumes use a larger diameter 0.45 µm pore size PVDF membrane filter (e.g., MilliporeSigma™ Steriflip™ Sterile Disposable Vacuum Filter Units, catalog number SE1M003M00). Add glycerol to the filtrate to 20% (v/v) and mix well prior to freezing in cryovials.

History

Depositors
A Camili, Tufts University
Type of isolate
Environmental
Year of origin
2019
Cross references
GenBank CP093442.1 Bdellovibrio reynosensis strain LBG001 chromosome, complete genome

Legal disclaimers

Intended use
This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use.
Warranty

The product is provided 'AS IS' and the viability of ATCC® products is warranted for 30 days from the date of shipment, provided that the customer has stored and handled the product according to the information included on the product information sheet, website, and Certificate of Analysis. For living cultures, ATCC lists the media formulation and reagents that have been found to be effective for the product. While other unspecified media and reagents may also produce satisfactory results, a change in the ATCC and/or depositor-recommended protocols may affect the recovery, growth, and/or function of the product. If an alternative medium formulation or reagent is used, the ATCC warranty for viability is no longer valid.  Except as expressly set forth herein, no other warranties of any kind are provided, express or implied, including, but not limited to, any implied warranties of merchantability, fitness for a particular purpose, manufacture according to cGMP standards, typicality, safety, accuracy, and/or noninfringement.

Disclaimers

This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use. Any proposed commercial use is prohibited without a license from ATCC.

While ATCC uses reasonable efforts to include accurate and up-to-date information on this product sheet, ATCC makes no warranties or representations as to its accuracy. Citations from scientific literature and patents are provided for informational purposes only. ATCC does not warrant that such information has been confirmed to be accurate or complete and the customer bears the sole responsibility of confirming the accuracy and completeness of any such information.

This product is sent on the condition that the customer is responsible for and assumes all risk and responsibility in connection with the receipt, handling, storage, disposal, and use of the ATCC product including without limitation taking all appropriate safety and handling precautions to minimize health or environmental risk. As a condition of receiving the material, the customer agrees that any activity undertaken with the ATCC product and any progeny or modifications will be conducted in compliance with all applicable laws, regulations, and guidelines. This product is provided 'AS IS' with no representations or warranties whatsoever except as expressly set forth herein and in no event shall ATCC, its parents, subsidiaries, directors, officers, agents, employees, assigns, successors, and affiliates be liable for indirect, special, incidental, or consequential damages of any kind in connection with or arising out of the customer's use of the product. While reasonable effort is made to ensure authenticity and reliability of materials on deposit, ATCC is not liable for damages arising from the misidentification or misrepresentation of such materials.

Please see the material transfer agreement (MTA) for further details regarding the use of this product. The MTA is available at www.atcc.org.

Disclosures

ATCC is a private, nonprofit biological resource center (BRC) and research organization that holds deposits of new type strains. ATCC tests for viability and identity upon the initial deposit of type strains. For those strains with a “TSD” designation, no further testing is performed and these strains are made available on behalf of the depositor per the requirements of the International Journal of Systematic and Evolutionary Microbiology (IJSEM), published by the Society for General Microbiology (SGM), and the International Committee on Systematics of Prokaryotes (ICSP).

ATCC may fully accessions new type strains into its general culture collection. At that time, ATCC will provide an “ATCC” designation to the strain, fully characterize the strain, and provide a Certificate of Analysis with authentication data for that specific item.

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Frequently Asked Questions

References

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