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Phanerochaete chrysosporium Burdsall

24725

An ampoule containing viable cells (may include spores and mycelia) suspended in cryoprotectant.
Product category
Fungi
Strain designation
VKM F-1767 [CBS 481.73, CCRC 36200, IMI 174727, NRRL 6361, QM 9998]
Type strain
Yes; type strain of Sporotrichum pulverulentum
Genome sequenced strain
Yes
Isolation source
Fruit and petiole of grape, Vitis vinifera
Geographical isolation
Kazakhstan; Almaty Province
Applications
Bioremediation
Biofuel production
Product format
Freeze-dried
Storage conditions
2°C to 8°C
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Documentation

Biosafety Icon Biosafety Level 1

ATCC determines the biosafety level of a material based on our risk assessment as guided by the current edition of Biosafety in Microbiological and Biomedical Laboratories (BMBL), U.S. Department of Health and Human Services. It is your responsibility to understand the hazards associated with the material per your organization’s policies and procedures as well as any other applicable regulations as enforced by your local or national agencies.

ATCC highly recommends that appropriate personal protective equipment is always used when handling vials. For cultures that require storage in liquid nitrogen, it is important to note that some vials may leak when submersed in liquid nitrogen and will slowly fill with liquid nitrogen. Upon thawing, the conversion of the liquid nitrogen back to its gas phase may result in the vial exploding or blowing off its cap with dangerous force creating flying debris. Unless necessary, ATCC recommends that these cultures be stored in the vapor phase of liquid nitrogen rather than submersed in liquid nitrogen.

Detailed product information

General

Specific applications
Bacterial resistance testing adhesives
Degrades 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene DDE
Degrades 2,4,5-trichlorophenol
Degrades 2,4,5-trichlorophenoxyacetic acid 2,4,5-T
Degrades 2,4,6-trichlorophenol
Degrades 2,4,6-trinitrotoluene TNT
Degrades 3,4-dichloroaniline
Degrades Congo red Congo Red
Degrades DDT
Degrades acid yellow 9
Degrades aldrin
Degrades amaranth
Degrades atrazine
Degrades azo dyes
Degrades azure B Azure B
Degrades benzene
Degrades benzo(a)pyrene
Degrades biphenyl
Degrades chlordane
Degrades creosote
Degrades cyclonite RDX, cyclotrimethylene trinitramine
Degrades dieldrin
Degrades ethylbenzene
Degrades fluorene
Degrades heptachlor
Degrades humic acid
Degrades lignin
Degrades lindane
Degrades mirex
Degrades o-chlorophenol
Degrades olive-mill wastewater
Degrades orange G Orange G
Degrades orange II Orange II
Degrades pentachlorophenol
Degrades phenanthrene
Degrades polychlorinated biphenyls
Degrades polycyclic aromatic hydrocarbons
Degrades rose Bengal
Degrades sulfanilic acid
Degrades toluene
Degrades tropaeolin O
Degrades veratryl alcohol
Degrades xylene
Fungus resistance testing adhesives
Produces N-(chlorophenol)-succinimides
Produces NAD(P)H menadione oxidoreductase 1, dioxin-inducible NADH: quinone oxidoreductase, NADH dehydrogenase (quinone)
Produces aryl-alcohol dehydrogenase
Produces cellobiose dehydrogenase (quinone) cellobiose:quinone oxidoreductase
Produces coal-solubilizing agent
Produces glyoxal oxidase
Produces lignin peroxidase diarylpropane oxygenase
Produces manganese peroxidase
Produces peroxidase
Produces xylan endo-1,3-beta-xylosidase xylan hydrolase, xylanase
Degrades diuron
Potential bioremediation agent: organochlorine pesticide, lignin, organopollutants
Potential biofuel production agent: lignocellulosic ethanol, biodiesel
Preceptrol
No

Characteristics

Comments
Vitis vinifera
UV- and benomyl-resistant
Degrades pine and straw alkali lignins
Degrades pulp and paper-mill wastewater
Degrades fluorene in soil
Degrades veratryl alcohol and its methyl ether by lignin peroxidase
Decolorizes textile-industry wastewater
Parental strain of RP-78 (genome sequencing strain by the Joint Genome Institute at the Department of Energy, USA)
This strain is also known as BKM-F-1767.
Technical information
ATCC Technical Services does not have technical information on patent deposits that are not produced or characterized by ATCC. Additional information can be found in the corresponding patent available from the patent holder or with the U.S. and/or international patent office.

Handling information

Medium
Temperature
25-30°C
Atmosphere
Aerobic
Handling procedure
For freeze-dry (lyophilized) ampoules:
  1. Open an ampoule according to enclosed instructions.
  2. From a single test tube of sterile distilled water (5 to 6 mL), withdraw approximately 0.5 to 1.0 mL with a sterile pipette and apply directly to the pellet.  Stir to form a suspension.
  3. Aseptically transfer the suspension back into the test tube of sterile distilled water.
  4. Let the test tube sit at room temperature (25°C) undisturbed for at least 2 hours; longer (e.g., overnight) rehydration might increase viability of some fungi.
  5. Mix the suspension well.  Use several drops (or make dilutions if desired) to inoculate recommended solid or liquid medium. Include a control that receives no inoculum.
  6. Incubate the inoculum at the propagation conditions recommended.
  7. Inspect for growth of the inoculum/strain regularly. The sign of viability is noticeable typically after 3 to 5 days of incubation. However, the time necessary for significant growth will vary from strain to strain.  
Handling notes
Type strain of Sporotrichum pulverulentum.

Additional, updated information on this product may be available on the ATCC® web site at www.atcc.org.

Quality control specifications

Sequenced data
18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

ACCTGCGGAAGGATCATTAACGAGTAACTGAACAGGTTGTAGCTGGCCTCTCGGGGCATGTGCACGCCTGGCTCATCCACTCTTCAACCTCTGTGCACTTGTTGTAGGTCGGTAGAAGAGCGAGCATCCTCTGATGCTTTGCTTGGAAGCCTTCCTATGTTTTACTACAAACGCTTCAGTTTAAGAATGTCTACCTGCGTACAACGCATCTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCATGCCTGTTTGAGTGTCATGGTATCCTCAACCTTCATAACTTTTTGTTATCGAAGGCTTGGACTTGGAGGTTGTGCTGGCTTCTAGTCGAGTCGGCTCCTCTTAAATGTATTAGCGTGAGTGTAACGGATCGCTTCGGTGTGATAATTATCTGCGCCGTGGTCGTGAAGTAACATAAGCTTGCGCTTCTAACCGTCCTTCAGTTGGACAACTTACTTTGACATCTGACCTCAAATCAGGTAGGA

History

Deposited as
Sporotrichum pulverulentum Novobranova
Depositors
LA Beljakova
Chain of custody
ATCC <-- LA Beljakova <-- TI Novobranova
Patent depository
This material was deposited with the ATCC Patent Depository to fulfill U.S. or international patent requirements. This material may not have been produced or characterized by ATCC.  As an International Depository Authority (IDA) for patent deposits, ATCC is required to complete viability testing only at time of initial deposit of patent material. Patent deposits are made available on behalf of the Depositor when the pertinent U.S. or international patent is issued, but material may not be used to infringe the patent claims.
Type of isolate
Food & Beverage; Plant
Cross references
GenBank KU729061 ITS including 5.8S rRNA gene
GenBank L18991 glyoxal oxidase cDNA
GenBank Z11729 cellobiohydrolase CBH1-6 gene, 3' end
GenBank X15599 Phanerochaete chrysosporium LIP2 gene for lignin peroxidase.
GenBank M18794 Phanerochaete chrysosporium ligninase precursor, mRNA, complete
GenBank M21913 Phanerochaete chrysosporium peroxidase isozyme H8 mRNA, partial
GenBank X51590 Phanerochaete chrysosporium GLG3 (LIP) gene for lignin peroxidase
GenBank X12698 Phanerochaete chrysosporium mRNA for ligninase (rLDM(TM)6) apoprotein
GenBank AADS01000000 Phanerochaete chrysosporium RP-78, whole genome shotgun sequencing project.

Legal disclaimers

Intended use
This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use.
Warranty

The product is provided 'AS IS' and the viability of ATCC® products is warranted for 30 days from the date of shipment, provided that the customer has stored and handled the product according to the information included on the product information sheet, website, and Certificate of Analysis. For living cultures, ATCC lists the media formulation and reagents that have been found to be effective for the product. While other unspecified media and reagents may also produce satisfactory results, a change in the ATCC and/or depositor-recommended protocols may affect the recovery, growth, and/or function of the product. If an alternative medium formulation or reagent is used, the ATCC warranty for viability is no longer valid.  Except as expressly set forth herein, no other warranties of any kind are provided, express or implied, including, but not limited to, any implied warranties of merchantability, fitness for a particular purpose, manufacture according to cGMP standards, typicality, safety, accuracy, and/or noninfringement.

Disclaimers

This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use. Any proposed commercial use is prohibited without a license from ATCC.

While ATCC uses reasonable efforts to include accurate and up-to-date information on this product sheet, ATCC makes no warranties or representations as to its accuracy. Citations from scientific literature and patents are provided for informational purposes only. ATCC does not warrant that such information has been confirmed to be accurate or complete and the customer bears the sole responsibility of confirming the accuracy and completeness of any such information.

This product is sent on the condition that the customer is responsible for and assumes all risk and responsibility in connection with the receipt, handling, storage, disposal, and use of the ATCC product including without limitation taking all appropriate safety and handling precautions to minimize health or environmental risk. As a condition of receiving the material, the customer agrees that any activity undertaken with the ATCC product and any progeny or modifications will be conducted in compliance with all applicable laws, regulations, and guidelines. This product is provided 'AS IS' with no representations or warranties whatsoever except as expressly set forth herein and in no event shall ATCC, its parents, subsidiaries, directors, officers, agents, employees, assigns, successors, and affiliates be liable for indirect, special, incidental, or consequential damages of any kind in connection with or arising out of the customer's use of the product. While reasonable effort is made to ensure authenticity and reliability of materials on deposit, ATCC is not liable for damages arising from the misidentification or misrepresentation of such materials.

Please see the material transfer agreement (MTA) for further details regarding the use of this product. The MTA is available at www.atcc.org.

Disclosures
This material is cited in a US and/or international patent and may not be used to infringe the claims. Depending on the wishes of the Depositor, ATCC may be required to inform the Depositor of the party to which the material was furnished.

Permits & Restrictions

Import Permit for the State of Hawaii

If shipping to the U.S. state of Hawaii, you must provide either an import permit or documentation stating that an import permit is not required. We cannot ship this item until we receive this documentation. Contact the Hawaii Department of Agriculture (HDOA), Plant Industry Division, Plant Quarantine Branch to determine if an import permit is required.

MORE INFORMATION ABOUT PERMITS AND RESTRICTIONS

References

Curated Citations

Paszczynski A, et al. Enzymatic activities of an extracellular, manganese-dependent peroxidase from Phanerochaete chrysosporium. FEMS Microbiol. Lett. 29: 37-41, 1985.

Leisola MS, et al. Homology among multiple extracellular peroxidases from Phanerochaete chrysosporium. J. Biol. Chem. 262: 419-424, 1987. PubMed: 2432065

Troller J, et al. Crystallization of a lignin peroxidase from the white-rot fungus Phanerochaete chrysosporium. Bio-Technology 6: 571-573, 1988.

Kersten PJ, Kirk TK. Involvement of a new enzyme, glyoxal oxidase, in extracellular H2O2 production by Phanerochaete chrysosporium. J. Bacteriol. 169: 2195-2201, 1987. PubMed: 3553159

George EJ, Newfeld RD. Degradation of fluorene in soil by fungus Phanerochaete chrysosporium. Biotechnol. Bioeng. 33: 1306-1310, 1989.

View All Curated Citations for this Product

Frequently Asked Questions

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