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Atopobium rimae (Olsen et al.) Collins and Wallbanks (ATCC® 49626)

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Strain Designations: VPI D140H-11A [NCFB 2896]  /  Type Strain: yes  /  Biosafety Level: 1

Deposited As Lactobacillus rimae Olsen et al.
Verified By Whole-genome Sequencing
Strain Designations VPI D140H-11A [NCFB 2896]
Isolation
Human gingival crevice
Biosafety Level 1

Biosafety classification is based on U.S. Public Health Service Guidelines, it is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country.

Product Format freeze-dried
Storage Conditions Frozen: -80°C or colder
Freeze-Dried: 2°C to 8°C
Live Culture: See Propagation Section
Preceptrol® no
Genome Sequenced Strain

Yes

Type Strain yes
Comments
This strain has been sequenced as a reference genome for the NIH Human Microbiome Project.
Genome sequencing strain (J. Craig Venter Institute)
Medium ATCC® Medium 1482: PYG plus 0.1% Tween 80
Growth Conditions
Temperature: 37°C
Atmosphere: Anaerobic
Name of Depositor WE Moore
Isolation
Human gingival crevice
References

Collins MD, et al. Taxonomic studies on a psychrophilic Clostridium from vacuum-packed beef: description of Clostridium estertheticum sp. nov.. FEMS Microbiol. Lett. 75: 235-240, 1992. PubMed: 1383083

Olsen I, et al. Lactobacillus uli sp. nov. and Lactobacillus rimae sp. nov. from the human gingival crevice and emended descriptions of Lactobacillus minutus and Streptococcus parvulus. Int. J. Syst. Bacteriol. 41: 261-266, 1991. PubMed: 1854640

Validation list no. 44. Int. J. Syst. Bacteriol. 43: 188-189, 1993.

Cross References

Nucleotide (GenBank) : ACFE01000000 Atopobium rimae ATCC 49626, whole genome shotgun sequencing project

Nucleotide (GenBank) : AF292371 Atopobium rimae 16S ribosomal RNA gene, partial sequence