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ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines (ASM NGS) 2022

Sheraton Inner Harbor Hotel, Baltimore, Maryland

October 16, 2022 - October 19, 2022

The ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines (ASM NGS) brings together researchers to explore the functionality and applications of next-generation sequencing technology. Join our poster sessions at the event and explore our resources below to learn about our end-to-end bioinformatics pipeline for the characterization and annotation of microbial strains.

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Join our poster sessions

An End-to-End Pipeline for Characterization and Annotation of Traceable Bacterial Material
John Bagnoli, BS, Senior Manager, Bioinformatics, ATCC
October 18, 2022

Having access to well-characterized, high-quality genomics data tied back to credible, traceable source materials is essential for life science research. Join our poster session to learn about our bioinformatics pipeline for assembling and annotating whole-genome sequencing data for the authenticated strains in ATCC's repository.

A Bioinformatics Pipeline for Characterizing SARS-CoV-2 Viral Stocks
Ford Combs, PhD, Bioinformatician, Sequencing and Bioinformatics Center, ATCC
October 18, 2022

Well-characterized SARS-CoV-2 stocks are critical for downstream research. Join our poster session to learn about our bioinformatics pipeline for evaluating SARS-CoV-2 variant identity and analyzing deviation due to selective pressures.

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Reference-quality sequences

Through the ATCC Genome Portal, you can easily search, access, and analyze hundreds of reference-quality genome sequences. Our optimized methodology is designed to achieve complete, circularized (when biologically appropriate), and contiguous genomic elements by using short-read (viruses) and hybrid (bacteria and fungi) assembly techniques. We then took our workflow one step further by accompanying each stage of the process with rigorous quality control analyses that ensure our data are the highest quality possible. Only the data that passes all quality control criteria are published to the ATCC Genome Portal. Visit the portal today to find the high-quality data you need for your research.

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Explore our resources

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NGS Standards

Discover how NGS Standards can enable you to optimize your diverse research applications with confidence and improve the consistency and reproducibility of your data run after run.

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Enhanced Authentication Initiative

Reproducible research starts with credible biological materials. That’s why ATCC has made a commitment to advance authentication in life science research. Through our Enhanced Authentication Initiative, we are enriching the characterization of our biological collections with reference-quality whole-genome sequencing data and making that data available to everyone.

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Molecular Diagnostics

Explore our expansive collection of molecular standards and inactivated organisms for molecular diagnostics development.

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Yellow balls of Staphylococcus, aureus bacteria.

Microbial Community Profiling

NGS Standards enable you to optimize your diverse microbiome research applications with confidence and improve the consistency and reproducibility of your data run after run. These standards support a broad array of applications ranging from method optimization to data interpretation, and they serve as superior controls for microbial community testing and assay development on any platform.

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Mixed assortment of different colored microbes, bacteria, viruses,  and protists.

Microbiome Research

ATCC's NGS standards for microbiome research are completely manufactured from high-quality, authenticated, fully sequenced ATCC cultures that are characterized by polyphasic testing. These standards support a broad array of applications ranging from method optimization to data interpretation, and they serve as superior controls for microbial community testing and assay development on any platform.

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Infectious Disease Research

ATCC offers an extensive array of microorganisms and nucleic acids that promote research leading to the development of novel methods for detecting, minimizing, and treating infectious diseases.

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