Ruegeria pomeroyi (Gonzalez et al.) Yi et al. (ATCC® 700808)

Strain Designations: DSS-3 [DSM 15171]  /  Type Strain: yes  /  Biosafety Level: 1

Permits And Restrictions

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Deposited As Silicibacter sp.
Strain Designations DSS-3 [DSM 15171]
Application
Degrades dimethyl sulfide DMS
Degrades dimethylsulfoniopropionate DMSP
Degrades methylmercaptan methanethiol
Oxidizes sulfite
Oxidizes thiosulfate
Biotechnology
Isolation
Saltwater
Georgia, United States
isolation date: March, 1998
Type Strain yes RefGonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004
Biosafety Level 1

Biosafety classification is based on U.S. Public Health Service Guidelines, it is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country.

Product Format freeze-dried
Preceptrol® no
Genome Sequenced Strain

Ruegeria pomeroyi DSS-3, complete genome

Type Strain yes RefGonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004
Comments
Genome sequenced strain
Medium ATCC® Medium 2138: YTSS medium
Growth Conditions
Temperature: 28.0°C
Atmosphere: Aerobic
Name of Depositor JM Gonzalez
Isolation
Saltwater
Georgia, United States
isolation date: March, 1998
Year of Origin 1998
References

González JM, et al. Transformation of Sulfur Compounds by an Abundant Lineage of Marine Bacteria in the alpha-Subclass of the Class Proteobacteria. Appl. Environ. Microbiol. 65: 3810-3819, 1999. PubMed: 10473380

water column, Georgia coast

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Moran MA, et al. Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Nature. 432(7019): 910-913, 2004. PubMed: 15602564

Moran MA, et al. Ecological genomics of marine Roseobacters. Appl. Environ. Microbiol. 73(14): 4559-4569, 2007. PubMed: 17526795

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Cross References

Nucleotide (GenBank) : AF098491 Silicibacter pomeroyi strain DSS-3 16S ribosomal RNA gene, partial sequence

Nucleotide (GenBank) : CP000031 Ruegeria pomeroyi DSS-3, complete genome

Nucleotide (GenBank) : CP000032 Ruegeria pomeroyi DSS-3 plasmid megaplasmid, complete sequence

Notice: Necessary PermitsPermits

These permits may be required for shipping this product:

  • Customers located in the state of Hawaii will need to contact the Hawaii Department of Agriculture to determine if an Import Permit is required. A copy of the permit or documentation that a permit is not required must be sent to ATCC in advance of shipment.
Basic Documentation