Pedobacter heparinus (Payza and Korn) Stein et al. (ATCC® 13125)

Strain Designations: [IFO 12017, LMG 10339, NCIB 9290, HIM 762-3]  /  Type Strain: yes  /  Biosafety Level: 1

Deposited As Flavobacterium heparinum Payza and Korn
Strain Designations [IFO 12017, LMG 10339, NCIB 9290, HIM 762-3]
Application
Degrades heparin
Produces chondroitin lyases chondoitinase AC II
Produces sulfoesterase
Produces sulphoglucosamine sulphamidase sulphamidase
Produces tumor suppressor LUCA-1 hyaluronidase 1, tumor suppressor LUCA-1, hyaluronoglucosaminidase
Biosafety Level 1

Biosafety classification is based on U.S. Public Health Service Guidelines, it is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country.

Product Format freeze-dried
Preceptrol® no
Genome Sequenced Strain

Pedobacter heparinus DSM 2366, complete genome.

Type Strain yes RefValidation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993. , RefSkerman VB, et al. Approved lists of bacterial names. Int J Syst Bacteriol 30: 225-420, 1980. , RefSteyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086
Comments
Taxonomy
Genome sequenced strain
Medium ATCC® Medium 3: Nutrient agar or nutrient broth
Growth Conditions
Temperature: 30.0°C
Name of Depositor ED Korn
References

Dietrich CP. Enzymic degradation of heparin. Biochem. J. 111: 91-95, 1969. PubMed: 5775690

Nature 177: 88, 1956.

Payza AN, Korn ED. The degradation of heparin by bacterial enzymes. I. Adaptation and lyophilized cells. J. Biol. Chem. 223: 853-858, 1956. PubMed: 13385232

Christensen P. Description and taxonomic status of Cytophaga heparina (Payza and Korn) comb. nov. (Basionym: Flavobacterium heparinum Payza and Korn 1956). Int. J. Syst. Bacteriol. 30: 473-475, 1980.

Validation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993.

Skerman VB, et al. Approved lists of bacterial names. Int J Syst Bacteriol 30: 225-420, 1980.

Steyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086

Validation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993.

Skerman VB, et al. Approved lists of bacterial names. Int J Syst Bacteriol 30: 225-420, 1980.

Steyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086

Cross References

Nucleotide (GenBank) : M33885 C. heparina 5S ribosomal RNA.

Nucleotide (GenBank) : CP001681 Pedobacter heparinus DSM 2366, complete genome.