Ruegeria pomeroyi (Gonzalez et al.) Yi et al. (ATCC® 700808)

Strain Designations: DSS-3 [DSM 15171]  /  Type Strain: yes  /  Biosafety Level: 1

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Deposited As Silicibacter sp.
Strain Designations DSS-3 [DSM 15171]
Application
Degrades dimethyl sulfide DMS
Degrades dimethylsulfoniopropionate DMSP
Degrades methylmercaptan methanethiol
Oxidizes sulfite
Oxidizes thiosulfate
Biotechnology
Isolation
Saltwater
Georgia, United States
isolation date: March, 1998
Type Strain yes RefGonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004
Biosafety Level 1
Product Format freeze-dried
Preceptrol® no
Genome Sequenced Strain

Ruegeria pomeroyi DSS-3, complete genome

Type Strain yes RefGonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004
Comments
Genome sequenced strain
Medium Medium 2138: YTSS medium
Growth Conditions
Temperature: 28.0°C
Atmosphere: Aerobic
Name of Depositor JM Gonzalez
Isolation
Saltwater
Georgia, United States
isolation date: March, 1998
Year of Origin 1998
References

González JM, et al. Transformation of Sulfur Compounds by an Abundant Lineage of Marine Bacteria in the alpha-Subclass of the Class Proteobacteria. Appl. Environ. Microbiol. 65: 3810-3819, 1999. PubMed: 10473380

water column, Georgia coast

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Moran MA, et al. Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Nature. 432(7019): 910-913, 2004. PubMed: 15602564

Moran MA, et al. Ecological genomics of marine Roseobacters. Appl. Environ. Microbiol. 73(14): 4559-4569, 2007. PubMed: 17526795

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Gonzalez JM, et al. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. Int. J. Syst. Evol. Microbiol. 53: 1261-1269, 2003. PubMed: 13130004

Cross References

Nucleotide (GenBank) : AF098491 Silicibacter pomeroyi strain DSS-3 16S ribosomal RNA gene, partial sequence

Nucleotide (GenBank) : CP000031 Ruegeria pomeroyi DSS-3, complete genome

Nucleotide (GenBank) : CP000032 Ruegeria pomeroyi DSS-3 plasmid megaplasmid, complete sequence

Notice: Necessary PermitsPermits

These permits may be required for shipping this product:

  • Customers located in the state of Hawaii will need to contact the Hawaii Department of Agriculture to determine if an Import Permit is required. A copy of the permit or documentation that a permit is not required must be sent to ATCC in advance of shipment.
Basic Documentation