Pedobacter heparinus (Payza and Korn) Stein et al. (ATCC® 13125)

Strain Designations: [IFO 12017, LMG 10339, NCIB 9290, HIM 762-3]  /  Type Strain: yes  /  Biosafety Level: 1

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Deposited As Flavobacterium heparinum Payza and Korn
Strain Designations [IFO 12017, LMG 10339, NCIB 9290, HIM 762-3]
Application
Degrades heparin
Produces chondroitin lyases chondoitinase AC II
Produces sulfoesterase
Produces sulphoglucosamine sulphamidase sulphamidase
Produces tumor suppressor LUCA-1 hyaluronidase 1, tumor suppressor LUCA-1, hyaluronoglucosaminidase
Type Strain yes RefValidation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993. , RefSkerman VB, et al. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30: 225-420, 1980. , RefSteyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086
Biosafety Level 1
Product Format freeze-dried
Preceptrol® no
Genome Sequenced Strain

Pedobacter heparinus DSM 2366, complete genome.

Type Strain yes RefValidation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993. , RefSkerman VB, et al. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30: 225-420, 1980. , RefSteyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086
Comments
Taxonomy
Genome sequenced strain
Medium Medium 3: Nutrient agar or nutrient broth
Growth Conditions
Temperature: 30.0°C
Name of Depositor ED Korn
References

Dietrich CP. Enzymic degradation of heparin. Biochem. J. 111: 91-95, 1969. PubMed: 5775690

Nature 177: 88, 1956.

Payza AN, Korn ED. The degradation of heparin by bacterial enzymes. I. Adaptation and lyophilized cells. J. Biol. Chem. 223: 853-858, 1956. PubMed: 13385232

Christensen P. Description and taxonomic status of Cytophaga heparina (Payza and Korn) comb. nov. (Basionym: Flavobacterium heparinum Payza and Korn 1956). Int. J. Syst. Bacteriol. 30: 473-475, 1980.

Validation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993.

Skerman VB, et al. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30: 225-420, 1980.

Steyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086

Validation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993.

Skerman VB, et al. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30: 225-420, 1980.

Steyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086

Validation list no. 47. Int. J. Syst. Bacteriol. 43: 864-865, 1993.

Skerman VB, et al. Approved lists of bacterial names. Int. J. Syst. Bacteriol. 30: 225-420, 1980.

Steyn PL, et al. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. Proposal of the family Sphingobacteriaceae fam. nov.. Int. J. Syst. Bacteriol. 48: 165-177, 1998. PubMed: 9542086

Cross References

Nucleotide (GenBank) : M33885 C. heparina 5S ribosomal RNA.

Nucleotide (GenBank) : CP001681 Pedobacter heparinus DSM 2366, complete genome.

Notice: Necessary PermitsPermits

These permits may be required for shipping this product:

  • Customers located in the state of Hawaii will need to contact the Hawaii Department of Agriculture to determine if an Import Permit is required. A copy of the permit or documentation that a permit is not required must be sent to ATCC in advance of shipment.
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